页数:72页文件大小:5.52 MB来源: 微生物学ppt课件
本课件为英文版微生物代谢章节,从分解代谢与合成代谢的关系出发,介绍生物氧化、呼吸与发酵等能量代谢途径,讲解微生物特有的合成代谢,并说明代谢调控及次级代谢产物的应用。
Chapter 6 Microbial Metabolism
An Overview metabolismmetabolism:the sum total of all chemical reactions occurring in the cell metabolismcatabolismanabolismComplex moleculescatabolismanabolismSimple moleculesATP[H]
Section 1 Energy Metabolism in MicrobesPrimary EnergyOrganic CompoundsSunlightInorganic Compoundsin Reduced State ATPATPChemoheterotrophPhotoautotrophPhotoheterotrophChemoautotrophsummarize
The breakdown of glucose to pyruvate fermentationrespiration(aerobic or anaerobic respiration)Chemoheterotrophbiological oxidationand energy ReleaseProcess——Dehydrogenation, Giving Hydrogen and Accepting Hydrogen (Electron)Function——Releasing Energy (ATP), Engendering Reducing Power [H] and Producing Intermediate Metabolitesbiological oxidation
Glocose——representativesubstrateofbiologicaloxidationEmbden-Meyerhof-ParnasPathway(Glycolysis)HexoseMonophosphatePathwayEntner-DoudoroffPathway(KDPGPathway)PK(phosphoketolase)pathway1 The breakdown of glucose to pyruvate
Uses pentoses and NADPHOperates with glycolysis2)Hexose Monophosphate Pathway (HMP)(PentosePhosphatePathway,PhosphogluconatePathway,Warburg-DickensPathway)
fructose 6-phosphates:be converted toglucose 6-phosphates,be returned toPentose Phosphate Pathwayglyceraldehyde 3-phosphate:a.throughEMP pthway,be converted to pyruvate,intoTCApthwayb.converted toHexose Phosphate,be returned to Pentose Phosphate PathwayThe overallreaction:6glucose 6-
3) Entner-Doudoroff Pathway (KDPG Pathway)1952,Entner-Doudoroff :Pseudomonas saccharophilaprocess:(4 septs)1 Glucoseglucose 6-phosphates 6-phosphogluconateKDPG6-phosphogluconate dehydrataseglyceraldehyde 3-phosphate+ pyruvate2-oxo-3-deoxy-6-phosphogluconatealdolaseProduces NADPH and 1 ATPDoes not involve glycolysisPseudomonas, Rhizobium, Agrobacterium
1.definitionsbroader:usemicroorganism to produceusefulmetabolic productnarrower:under anaerobic conditions,be defined as an energy-yielding processusing itselfmetabolic intermediates asthe final hydrogen
3) mixed acid, butanediol fermentationa.mixed acid fermentation:——E.coli, Salmonella, Shiella1 Gpyruvatelactatelactatedehydrogenaseacetyl-CoA+formylPyruvate formate lyaseoxaloacetatePropionicacidMethylmalonyl CoAcarboxyltransferasephosphotransacetylasealdehydedehydrogenaseacetokinaseAlcohol dehydrogenaseacetateethanolCO2+ H2
4)acetone-butanol fermentation(mixed, acetone:butanol: ethanol = 3:6:1)——Clostridium acetobutyricum2 pyruvate2 acetyl-CoAacetoacetyl-CoAacetone+CO2(acetate CoA transferase)butanolacetyl-CoA acetyltransferase(acetoacetate decarboxylase)
5)stickland reactionMain point:amino acid oxidationcouples with other amino acids reduction, generates 1ATPhydrogendonors(oxidation) amino acid:Ala, Leu, Ile, Val, His, Ser, Phe, Tyr, Tryhydrogenacceptors (reduction) amino acid:Gly, Pro, Arg, Met, Leo, and so on.
The Stickland reactionis used to oxidizeseveral amino acids: alanine, leucine,isoleucine, valine, phenylalanine,tryptophan, and histidine. Bacteria alsoferment amino acids (e.g., alanine, glycine,glutamate, threonine, and arginine) byother mechanisms.
Oxidized glycinepyruvate-NH3NAD+NADHacetyl-CoANAD+NADHacetate+ ATPalanineacetatealanine-NH3Reducedone amino acid is oxidized and a second amino acid acts as the electron acceptor.
3 Respirationaerobic respirationanaerobic respiration1. Aerobic Respiration:The final electron acceptor in the electron transport chain is molecular oxygen (O2).Respiration
Give the substrate and products of the tricarboxylic acid cycle.To provide carbon skeletons for use in biosynthesisWhat chemical intermediate links glycolysis to the TCA cycle?The complete cycle appears to be functional in many aerobic bacteria, free-living protozoa, and most algae and fungi. (1)Tricarboxylic Acid Cycle (Krebs Cycle)
(2)The Electron Transport ChainSome important electron transport chain carriers of the respiration chain in microbesNicotianamideadeninedinucleotide(NAD)andnicotianamideadeninedinucleotidephosophate(NADP)Flavin adenine dinucleotide (FAD) and flavin mononucleotide (FMN)Iron-sulphur proteinUbiquinone (Coenzyme Q) Cytochrome system
The Mitochondrial Electron Transport Chain. Many of the more important carriers are arranged at approximately the correct reduction potential and sequence. In the eucaryotic mitochondrial are organized into four complexes that are linked by coenzyme Q (I and cytochrome c (Cyt c). Electrons flow from NADH and succinl down the reduction potential gradient to oxygen.
(3)Oxidative phosphorylqtionChemiosmotic hypothesisChemiosmotic hypothesis-first formulated in 1961 by the British biochemist Peter.Mitchell.According to the Chemiosmotic hypothesis,the electron transport chain is organized so that protons move outward from the mitochondrial matrix and electrons are transported inward. Protons movement may result either from carrier loops,as shown in figure 9.14,or from the action of special proton pumps that derive their energy from electron transport.The result is proton motive force(PMF), composed of a gradient of protons and a membrane porential due to the unequal distribution of charges.When protons return to the mitochondrial matrix driven by the proton motive force,ATP is synthesized in a reversal of the ATP hydrolysis reaction.
Nitrate RespirationHomotype:NO3-
Sulfur Respiration(Sulfur reduction)——useelementSulfurasthe finalelectron accepteronly.electrondonors:aceticm acid, small peptide,glucose,carbohydrate polymers;For example, Desulfuromonas acetoxidansCarbonate Respiration(Carbonate reduction)——use CO2、HCO3-
Section2specialmetabolisminmicrobes1 Bacterial Photosynthesis1. Cyclic photophosphorylation2. Noncyclic photophosphorylation3. Photosynthesis of purple membrane in halophilic bacteria
purple sulfur bacteria:Chromatiumpurplenonsulfur bacteria:Rhodospirillum, Rhodopseudomonasgreen sulfur bacteria:Chlorobiumgreen nonsulfur bacteria :Chloroflexus
Thephotosyntheticelectrontransportsysteminthepurplenonsulfurbacterium,Rhodobactersphaeroides.Thisschemeisincompleteandtentative.Ubiquinone(Q)isverysimilartocoenzymeQ.BPhstandsbacteriopheophytin.NAD+andtheelectronsourcesuccinateareincolor.Purple NonsulfurBacterial Photosynthesis. Cyclic photophosphorylation
LightenergyisusedtomakeATPbycyclicphotophosphorylationmoveelectronsfromsulfurdonors(greenandblue)toNAD+(red).Theelectrontransportchainhasaquinonecalledmenaquinone(MK).Green SulfurBacterial Photosynthesis.The photosynthetic electron transport system in the green sulfur bacterium, Chlorobium limicola.
2)noncyelic photophosphorylationElectrons also can travel in a noncyclic pathway involving bothphotosystems. P700 is excited and donates electrons to ferredoxin asbefore. In the noncyclic route, however, reduced ferredoxin reducesNADP+ to NADPH .
noncyelic photophosphorylation
electronsflowfromwaterallthewaytoNADPwiththeaidofenergyfromtwophotosystems,ATPissynthesizedbynoncyelicphotophosphorylation.oneATPandoneNADPHareformedwhentwoelectronstravelthrough
3) Photosynthesis of purple membrane in halophilic bacteriaHalobacteriumuses bacteriorhodopsin, not chlorophyll, to generate electrons for a chemiosmotic proton pump.
2 ChemolithotrophBiological Oxidation, Energy Release and CO2Fixation in ChemoautotrophaerobicOxidationof inorganicelectron donorsgenerates ATPby Oxidative Phosphorylationelectron donors: H, reducing nitride, reducing sulphide and Fe2+. Use CO2Fixation of Calvin cycle as carbon resourcesCO2 reduced to [CH2O]——consume much energy and reducing power
1.EnergymetabolismofnitribacteriaOxidationNitrobacter: NH3 NO2-OxidationNitrosomonas:NO2-NO3-When two genera such Nitrobacterand Nitrosomonastogether in a niche, ammonia is grow converted to nitrate, a process called nitrification
3.Sulfur BacteriaEnergy Metabolism of Sulfur Bacteria ThiobacillusEnergysource:Thiosulfatefreelysolubleinwaterandintheneutralcondition.The respiratory chain of Thiobacilli: NADH2 dehydrogenase, Fumaric reductase, flacoprotein(FP), ubliquinone(CoQ), cyt b, Cytochrome oxidase aa3
energy-yielding process :First sept: H2S, S0, S2O32-, oxidatived to SO32-Second sept: SO32-oxidatived to SO42-and generates energy
(1) iron bacteria(iron oxidizing bacteria)oxidativeFe2+into Fe3+and generatesenergy.For example,Ferrobacillus,Gallionella,Leptothrix,Crenothrix andSphaerotilus;
Ironoxidizingbacteria:energy-yielding process by Oxidative Phosphorylation
3 Biologic Fixation of Nitrogen1. Kinds of nitrogen fixing microorganismFree-living nitrogen fixing bacteria Symbiosis nitrogen fixing bacteria Association nitrogen fixing bacteria
SupplyingATPReducingForce[H]anditsCarrierNitrogenase (molebdoferredoxin, azoferredoxin)N2Mg2+Strict Anoxy microenvironment2. The necessary condition of Nitrogen fixation
1966,M.J.DilworthandR.ScholhornNitrogenase:N2NH3①N2ON2+H2O②N3-N2+NH3③C2H2C2H4④HCNCH4+NH3+[CH3NH2]⑤CH3NCCH4+CH3NH2+[C2H4,C2H6]3.Determination of Nitrogenase Activity
4.The Biochemistry Pathway of Nitrogen FixationN2+6e+6H++12ATP2NH3+12ADP+12Pi5.Hydrogen Reaction of NitrogenaseN2NH3, 2H+H2N2+8H++8e+16Mg-ATP2NH3+H2+16Mg-ADP+16Pi
A. The Protection Mechanism in Aerobic Free-living Nitrogen Fixting Bacteriaa. Breathing Protectionb. Conformation ProtectionB. The Protection Mechanism in Cyanobacteriaa. Special Reducing Heterocysts Differentiatedb. The Protection of Nitrogenase in Cyanobacteriathat don’t form heterocystsC. The Antioxygen Protection of Nitrogenase in Root Nodule Bacteriaa. Symbiosis Rhizobia in Leguminous Plantb. Symbiosis Rhizobia in nonleguminous Plant6. The antioxygen mechamism of Nitrogenase in Aerobic Nitrogen Fixing Bacteria
N-acetylmuramic acid“Park”nucleotide“Park” nucleotidehydrophilicity—
“Park”nucleotide peptidoglycan unitin Bacterial Cytoplasmin Bacterial Cytomembranein outside of Bacterial Cytomembrane
Transglycosylation and Transpeptidation
Section 3 microbial secondary metabolismand its productThere are many kinds ofsecondary metabolitewhich primary metabolic products serve assubstrate, some of these products have a
Microbial secondary metabolism and its productRegulation of secondary metabolism1primarymetabolism2nitriccompound3inductionandfeedbackinhibition
Section 4 Regulation of metabolism andferment product practise.Metabolic regulation kinds are various,microorganism produce metabolic product tooffer service for fermentation industry and tobenefit for mankind with their relevant
Using microbial metabolic productMetabolic producttype:1 primary metabolic products:amino acid, enzyme or coenzyme;2 submetabolicproducts:antibiotic, hormone, alkaloid, toxin, vitamin, and so on.Fermentation type:1 Naturalfermentation: ethanol, lacate and so on,2 Metabolic controlfermentation: terminal products: lysine, guanylic acid, adenylic acid and so on ;metabolic intermediates: citrate,α-ketoglutaric acid, succinate,inosinic acid,xanthine nucleotide and so on;
Controloffermentcondiction1)cultrue condition:temperature, pH and so on;2)nutrition component:glucose concentration, C/N, growth factor, and so on;3)dissolved oxygen: aeration numbr, agitation and so on.。
Control of Metabolic regulation(1)auxotrophic regulatory mutantLysinefermentation——(homoserine auxotrophic mutant)
Microbial metabolism and Metabolic engneeringMetabolic Engineering introduce xylose Metabolic pathwayXylose xylitolXyluloseXlulokinaseXylulose-5-PGlucosePyruvateEthanolXylose isomeraseXylose reductasexylitol dehydrogenasePentose phosphoketolasPathwayPichia stipitisbacteriaGlycolysisEntner-DoudoroffPathway
Using active metabolism in microbes1biotransformation,2microbialstrawxylan-degrading,3microbiohydrometallurgyandoilextraction,4biodegradation
References:PrescottLM,HarleyJP,andKleinDA.Microbiology(5thed.),HighereducationpressandMcGraw-HillCompanies,Inc.2002MichaelTM,JohnMM,JackP.Brockbiologyofmicoorganisms,Internationaledition,PearsonEducation,Inc.2003TalaroK.P.Foundationsinmicrobiology(FifthEdition),HighereducationpressandMcGraw-HillCompanies,Inc.2005
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